Dataset: Pyrosequencing reads (454) of marine RNA virus metagenomes collected Kaneohe Bay, HI during 2009 (Diversity and ecology of marine RNA viruses project)

Name: Pyrosequencing reads (454) of marine RNA virus metagenomes collected Kaneohe Bay, HI during 2009 (Diversity and ecology of marine RNA viruses project)
Published: 2016-01-26
Keywords: biota, oceans

ValidatedFinal no updates expectedVersion 2016-01-26 (2016-01-26)Dataset Type:Other Field Results

Principal Investigator: Grieg Steward (University of Hawaiʻi at Mānoa)

Co-Principal Investigator: Dr Alexander Culley (University of Hawaiʻi at Mānoa)

Co-Principal Investigator: Dr Guylaine Poisson (University of Hawaiʻi at Mānoa)

BCO-DMO Data Manager: Nancy Copley (Woods Hole Oceanographic Institution)

Project: Diversity and ecology of marine RNA viruses (Diversity and ecology of marine RNA viruses)

Cite Dataset

Centroid: latitude: 21.436536, longitude: -157.777361
Temporal Extent: -

This datasest links to accessions at the iMicrobe data repository containing fasta formatted nucleic acid sequences. Samples are from Surface waters of Kaneohe Bay, a tropical embayment on eastern shore of Oahu, HI, 21° 25’ 46.80” N, 157° 47’ 31.51” W.

Sample Name: CAM_SMPL_000815 (collected Aug 1, 2009)
Link: http://data.imicrobe.us/sample/view/333

Sample Name: CAM_SMPL_000824 (collected Jun 3, 2010)
Link: http://data.imicrobe.us/sample/view/324

Related References:

Culley AI, JA Mueller, M Belcaid, EM Wood-Charlson, G Poisson, GF Steward (2104). The characterization of RNA viruses in tropical seawater using targeted PCR and metagenomics. mBio 5(3):e01210-14. doi:10.1128/mBio.01210-14.

Steward GF, AI Culley, JA Mueller, EM Wood-Charlson, M Belcaid, G Poisson (2013). Are we missing half the viruses in the sea? ISME Journal 7(3) 627-679.

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