Dataset: NCBI accession numbers and associated metadata for raw low-coverage genomic sequence reads from 876 different Atlantic silverside individuals

ValidatedFinal no updates expectedDOI: 10.26008/1912/bco-dmo.754623.1Version 1 (2019-02-04)Dataset Type:Other Field ResultsDataset Type:experimental

Principal Investigator: Stephen R. Palumbi (Stanford University - Hopkins)

Contact: Nina Overgaard Therkildsen (Cornell University)

BCO-DMO Data Manager: Shannon Rauch (Woods Hole Oceanographic Institution)


Project: High resolution genome changes during evolution in a classic fisheries experiment (Fishery Genome Changes)


Abstract

NCBI accession numbers and associated metadata for raw low-coverage genomic sequence reads from 876 different Atlantic silverside individuals

Raw low-coverage genomic sequence reads: 1190 files with raw low-coverage genomic sequence reads from 876 different Atlantic silverside individuals (some individuals are represented by multiple sequence data files) are deposited in the NCBI Sequence Read Archive (SRA) with accession numbers SRS2001281- SRS2003099 associated with BioProject PRJNA376564 and BioSamples SAMN06436077 - SAMN06436952.


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Methods, Results

Therkildsen, N. O., & Palumbi, S. R. (2017). Practical low-coverage genomewide sequencing of hundreds of individually barcoded samples for population and evolutionary genomics in nonmodel species. Molecular Ecology Resources, 17(2), 194–208. doi:10.1111/1755-0998.12593