| Data File(s) | Type | Description | Action |
|---|---|---|---|
output_drone_variables.zip (75.11 KB) | ZIP Archive (ZIP) | scale at which the data in the file is measured is shown in the naming convention of the file. For example, combined_edge1_buf20 corresponds to combined data from all drone flights where edge habitat was defined as being within 1 meter of the waters edge, and the habitat buffer around each site was 20 meters. Calculated habitat metrics around sampled sites for each combination of buffer distances (20–150 m) and edge distances (1, 3, 5 m). Scale at which the data in the file is measured is shown in the naming convention of the file. For example, combined_edge1_buf20 corresponds to combined data from all drone flights where edge habitat was defined as being within 1 meter of the waters edge, and the habitat buffer around each site was 20 meters. Each file contains the following parameters: Column Name,Column Description [Include meaning of any codes or flags used in data column as well as detection limits.],Units of measurement,missing data/no data value site_date_key,unique identifier for sampling event (site and location) ,unitless ,blank = missing data Mangrove ,Fraction of total circle area classified as mangrove habitat within range of waters edge,unitless,blank = missing data Manmade,Fraction of total circle area classified as manmade habitat within range of waters edge,unitless,blank = missing data Saltmarsh ,Fraction of total circle area classified as saltmarsh habitat within range of waters edge,unitless,blank = missing data edge_man,"redundant column, identical to Mangrove",unitless,blank = missing data edge_mar ,"redundant column, identical to Saltmarsh",unitless,blank = missing data edge_l.mangrove ,calculated as edge_man/(edge_man + edge_mar) to get the % of edge habitat classified as mangrove (excluding man-made habitats which were negligible) ,unitless,blank = missing data edge_l.marsh ,calculated as edge_mar/(edge_man + edge_mar) to get the % of edge habitat classified as marsh (excluding man-made habitats which were negligible) ,unitless,blank = missing data land_water_ratio,"the % of the circle area classified as either marsh, mangrove, or manmade over the total area of the circle (% Land) ",unitless,blank = missing data fetch_ddistance ,"Calculation of distance wind, traveling in the prevailing direction over the month of september, would travel over water before passing over the site",meters,blank = missing data site_type,"classification of this site ( marsh ifedge_l.marsh >.75 , mixed if between .25 and .75, mangrove if edge_l marsh <.25)",unitless ,blank = missing data | |
processing_drone_variables.zip (35.15 MB) | ZIP Archive (ZIP) | Zip file contains 1 folder and 2 files to calculate habitat metrics and spatial relationships for sites sampled in Port Fourchon, LA. * fourchonenv: folder with code Environment used for High Performance Computing Cluster runs generating this dataset. * permutations_smallscale.sh: SLURM Batch submission code for smallscale_permutations_241029.py. Submitted to UGA's Sapelo2 high performance computing cluster to individually run each habitat scale permutation and combine data from separate drone flights (each flight encompasses a handful of sites) * smallscale_permutations_241029.py: Small Scale Permutation Code. Runs analysis on permutation of edge distance and buffer radius, then merges results from different drone flights. |
Files
Filename: output_drone_variables.zip (75.11 KB)
Type: ZIP Archive (ZIP)
Description: scale at which the data in the file is measured is shown in the naming convention of the file. For example, combined_edge1_buf20 corresponds to combined data from all drone flights where edge habitat was defined as being within 1 meter of the waters edge, and the habitat buffer around each site was 20 meters. Calculated habitat metrics around sampled sites for each combination of buffer distances (20–150 m) and edge distances (1, 3, 5 m). Scale at which the data in the file is measured is shown in the naming convention of the file. For example, combined_edge1_buf20 corresponds to combined data from all drone flights where edge habitat was defined as being within 1 meter of the waters edge, and the habitat buffer around each site was 20 meters. Each file contains the following parameters: Column Name,Column Description [Include meaning of any codes or flags used in data column as well as detection limits.],Units of measurement,missing data/no data value site_date_key,unique identifier for sampling event (site and location) ,unitless ,blank = missing data Mangrove ,Fraction of total circle area classified as mangrove habitat within range of waters edge,unitless,blank = missing data Manmade,Fraction of total circle area classified as manmade habitat within range of waters edge,unitless,blank = missing data Saltmarsh ,Fraction of total circle area classified as saltmarsh habitat within range of waters edge,unitless,blank = missing data edge_man,"redundant column, identical to Mangrove",unitless,blank = missing data edge_mar ,"redundant column, identical to Saltmarsh",unitless,blank = missing data edge_l.mangrove ,calculated as edge_man/(edge_man + edge_mar) to get the % of edge habitat classified as mangrove (excluding man-made habitats which were negligible) ,unitless,blank = missing data edge_l.marsh ,calculated as edge_mar/(edge_man + edge_mar) to get the % of edge habitat classified as marsh (excluding man-made habitats which were negligible) ,unitless,blank = missing data land_water_ratio,"the % of the circle area classified as either marsh, mangrove, or manmade over the total area of the circle (% Land) ",unitless,blank = missing data fetch_ddistance ,"Calculation of distance wind, traveling in the prevailing direction over the month of september, would travel over water before passing over the site",meters,blank = missing data site_type,"classification of this site ( marsh ifedge_l.marsh >.75 , mixed if between .25 and .75, mangrove if edge_l marsh <.25)",unitless ,blank = missing data
Type: ZIP Archive (ZIP)
Description: scale at which the data in the file is measured is shown in the naming convention of the file. For example, combined_edge1_buf20 corresponds to combined data from all drone flights where edge habitat was defined as being within 1 meter of the waters edge, and the habitat buffer around each site was 20 meters. Calculated habitat metrics around sampled sites for each combination of buffer distances (20–150 m) and edge distances (1, 3, 5 m). Scale at which the data in the file is measured is shown in the naming convention of the file. For example, combined_edge1_buf20 corresponds to combined data from all drone flights where edge habitat was defined as being within 1 meter of the waters edge, and the habitat buffer around each site was 20 meters. Each file contains the following parameters: Column Name,Column Description [Include meaning of any codes or flags used in data column as well as detection limits.],Units of measurement,missing data/no data value site_date_key,unique identifier for sampling event (site and location) ,unitless ,blank = missing data Mangrove ,Fraction of total circle area classified as mangrove habitat within range of waters edge,unitless,blank = missing data Manmade,Fraction of total circle area classified as manmade habitat within range of waters edge,unitless,blank = missing data Saltmarsh ,Fraction of total circle area classified as saltmarsh habitat within range of waters edge,unitless,blank = missing data edge_man,"redundant column, identical to Mangrove",unitless,blank = missing data edge_mar ,"redundant column, identical to Saltmarsh",unitless,blank = missing data edge_l.mangrove ,calculated as edge_man/(edge_man + edge_mar) to get the % of edge habitat classified as mangrove (excluding man-made habitats which were negligible) ,unitless,blank = missing data edge_l.marsh ,calculated as edge_mar/(edge_man + edge_mar) to get the % of edge habitat classified as marsh (excluding man-made habitats which were negligible) ,unitless,blank = missing data land_water_ratio,"the % of the circle area classified as either marsh, mangrove, or manmade over the total area of the circle (% Land) ",unitless,blank = missing data fetch_ddistance ,"Calculation of distance wind, traveling in the prevailing direction over the month of september, would travel over water before passing over the site",meters,blank = missing data site_type,"classification of this site ( marsh ifedge_l.marsh >.75 , mixed if between .25 and .75, mangrove if edge_l marsh <.25)",unitless ,blank = missing data
Filename: processing_drone_variables.zip (35.15 MB)
Type: ZIP Archive (ZIP)
Description: Zip file contains 1 folder and 2 files to calculate habitat metrics and spatial relationships for sites sampled in Port Fourchon, LA. * fourchonenv: folder with code Environment used for High Performance Computing Cluster runs generating this dataset. * permutations_smallscale.sh: SLURM Batch submission code for smallscale_permutations_241029.py. Submitted to UGA's Sapelo2 high performance computing cluster to individually run each habitat scale permutation and combine data from separate drone flights (each flight encompasses a handful of sites) * smallscale_permutations_241029.py: Small Scale Permutation Code. Runs analysis on permutation of edge distance and buffer radius, then merges results from different drone flights.
Type: ZIP Archive (ZIP)
Description: Zip file contains 1 folder and 2 files to calculate habitat metrics and spatial relationships for sites sampled in Port Fourchon, LA. * fourchonenv: folder with code Environment used for High Performance Computing Cluster runs generating this dataset. * permutations_smallscale.sh: SLURM Batch submission code for smallscale_permutations_241029.py. Submitted to UGA's Sapelo2 high performance computing cluster to individually run each habitat scale permutation and combine data from separate drone flights (each flight encompasses a handful of sites) * smallscale_permutations_241029.py: Small Scale Permutation Code. Runs analysis on permutation of edge distance and buffer radius, then merges results from different drone flights.