Dataset: Phytoplankton pigment concentrations for samples collected from the upper 200 meters during the GP17-OCE cruise on R/V Roger Revelle (RR2214) in the South Pacific and Southern Oceans from December 2022 to January 2023

This dataset has not been validatedData not availableVersion 1 (2025-03-11)Dataset Type:Cruise Results

Principal Investigator: Benjamin Twining (Bigelow Laboratory for Ocean Sciences)

BCO-DMO Data Manager: Shannon Rauch (Woods Hole Oceanographic Institution)


Program: U.S. GEOTRACES (U.S. GEOTRACES)

Project: US GEOTRACES GP17 Section: South Pacific and Southern Ocean (GP17-OCE) (GP17-OCE)


Abstract

This dataset contains phytoplankton pigment concentrations for samples collected from the upper 200 meters at most stations along the GP17-OCE cruise on R/V Roger Revelle (RR2214), from Tahiti south across the Antarctic Circumpolar Current to 67S, then east towards Chile. Samples were collected at the upper-most 4-6 stations, and from surface waters with a towed fish. The expedition took place from December 2022 to January 2023.

Pigments were collected using a conventional rosette, and sampled from the shallowest 4-6 depths on casts. Typically the surface sample was also taken via an underway towfish. Pigments were collected into 2-liter (L) amber bottles, triple rinsed with sample prior to filling. They were immediately filtered under vacuum through 25-millimeter (mm) GF/F filters. They were folded and placed inside aluminum foil packets, labeled with appropriate GEOTRACES numbers, and frozen at -80 degrees Celsius (°C).

Samples were analyzed at Oregon State University’s Ocean Ecology and Biogeochemistry Facilities (https://ceoas.oregonstate.edu/ocean-ecology-and-biogeochemistry-facilities). Their method for pigment analysis is based on the protocol described by Mantoura and Lewellyn (1983) and modified according to Bidigare et al. (1989). Briefly, samples are extracted for up to 48 hours in 100% acetone at -20°C, then analyzed on a Waters 2690 separations module equipped with a C18 column and full spectrum photodiode array detector. Pigment standards for calibration and response factor calculations are obtained from DHI Group in Denmark. An SOP is attached (HOT-Bidigare-HPLC_SOP.docx).


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Methods

Bidigare, R. R., Schofield, O., & Prézelin, B. B. (1989). Influence of zeaxanthin on quantum yield of photosynthesis of Synechococcus clone WH7803 (DC2). Marine Ecology Progress Series, 56(1/2), 177–188. http://www.jstor.org/stable/24835757
Methods

Mantoura, R. F. C., & Llewellyn, C. A. (1983). The rapid determination of algal chlorophyll and carotenoid pigments and their breakdown products in natural waters by reverse-phase high-performance liquid chromatography. Analytica Chimica Acta, 151, 297–314. https://doi.org/10.1016/s0003-2670(00)80092-6