| Data File(s) | Type | Description | Action |
|---|---|---|---|
965379_v1_arctic_genomes.csv (4.20 KB) | Comma Separated Values (.csv) | Primary data file for dataset ID 965379, version 1 |
Files
Type: Comma Separated Values (.csv)
Primary data file for dataset ID 965379, version 1
Bacteria were cultured and sequenced from the Arctic Ocean under 2-meter-thick sea ice to identify patterns of gene, loss, and rearrangement. Cultures were obtained by high-throughput dilution to extinction cultivation using cryopreserved samples. Bacteria selected for genome sequencing were grown in 1 liter of Puget Sound seawater media and sequenced using the Oxford Nanopore Technologies (ONT) R10.4.1 Flongle flow cells with the SQK-RAD114 rapid library prep kit (Oxford Nanopore Technologies, ...
Show moreViews
Downloads
These numbers come from web analytics and reflect real user activity on the site. They reliably show dataset usage and are mostly free of bot traffic.
Samples for cultivation were collected at 81.04° N, 10.62° E, from 25 meters (m) below the ice/water interface using a Hydro-Bios 2-liter (L) water sampler. Fifty milliliters (mL) were transferred to a polycarbonate bottle and then 1 mL of seawater was amended to 10% (v/v) glycerol, flash frozen in liquid nitrogen, and stored at -80 degrees Celsius (°C) until used for high-throughput dilution to extinction cultivation. Seawater for culture media (10 L) was collected at 80.96° N, 9.66° E from 1 m below the ice/water interface into acid washed and miliQ rinsed cubitainers. Seawater was then filter-sterilized using a tangential flow filtration (TFF) system equipped with a 30 kDa Pellicon XL Polyethersulfone Biomax filter (MilliporeSigma, Burlington, MA). The resulting media was collected in 1 L acid-washed and autoclaved polycarbonate bottles, incubated for 2 months at 4 °C, and checked for bacterial growth to ensure sterility prior to use.
Morris, R. (2025). Under the ice bacterial cultures and genome sequences from the R/V Kronprins Haakon in the Arctic Ocean from May 18 to 21, 2023. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2025-06-18 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.965379.1 [access date]
Terms of Use
This dataset is licensed under Creative Commons Attribution 4.0.
If you wish to use this dataset, it is highly recommended that you contact the original principal investigators (PI). Should the relevant PI be unavailable, please contact BCO-DMO (info@bco-dmo.org) for additional guidance. For general guidance please see the BCO-DMO Terms of Use document.