Deployment: Halanych_lab_2011-16

2011-08-01 - 2016-07-31 laboratory studies Platform:Auburn University lab (laboratory)

Description

Invertebrate genomics

DatasetLatest Version DateCurrent State
Collection and locality information by taxon of Hemichordata from global sites, Table 1, Cannon et al (2013) Biol. Bull. (Antarctic Inverts project)2016-12-29Preliminary and in progress
Hemichordata and Echinodermata NCBI accessions, Table 2, Cannon et al (2013) Biol. Bull. (Antarctic Inverts project)2016-12-22Preliminary and in progress
Collection and locality information of Hemichordata and Echinodermata from global sites, Table S1, Cannon et al (2014) Curr. Bio. (Antarctic Inverts project)2016-12-22Preliminary and in progress
Hemichordata and Echinodermata GenBank accessions, Table S2, Cannon et al (2014) Curr. Bio. (Antarctic Inverts project)2016-12-22Preliminary and in progress
GenBank accession numbers used in phylogenetic analysis in Table S1, Halanych et al (2013) Nature Comm. (Antarctic Inverts project)2016-12-22Preliminary and in progress
Video of acorn worm tubes, Halanych et al (2013) Nature Comm. (Antarctic Inverts project)2016-12-22Preliminary and in progress
Antarctic invertebrate collection locations and NCBI SRA accessions from Halanych and Kocot (2014) Biol Bull (Antarctic Inverts project)2016-12-22Preliminary and in progress
Best toll-like receptors (TLR) genes from Lophotrochozoa BLASTP search, from Table 3, Halanych and Kocot (2014) Biol. Bull. (Antarctic Inverts project)2016-12-27Preliminary and in progress
Best other leucine-rich repeat (LRR) genes from Lophotrochozoa BLASTP search, from Table 4, Halanych and Kocot (2014) Biol. Bull. (Antarctic Inverts project)2016-12-27Preliminary and in progress
Novel cyclooxygenase (COX) and peroxidasin (PXDN) sequences analyzed in Havird et al (2015) J Mol Evol., Table 1 (Antarctic Inverts project)2016-12-27Preliminary and in progress
Peroxidasin (PXDN) and myeloperoxidase (MPO) sequences used as outgroups in Havird et al (2015) J Mol Evol., Table 2 (Antarctic Inverts project)2016-12-27Preliminary and in progress
Conservation of known vertebrate cyclooxygenase functional domains and residues, from Havird et al (2015) J Mol Evol., Table 3 (Antarctic Inverts project)2016-12-27Preliminary and in progress
List of Odontasteridae (Asteroidea) species used in study along with description reference, distribution, depth, and catalog numbers, Table 1 from Janosik & Halanych (2013) (Antarctic Inverts project)2016-12-27Preliminary and in progress
Outgroup species, description reference, and GenBank accession numbers from Table 2, from Janosik & Halanych (2013) (Antarctic Inverts project)2016-12-27Preliminary and in progress
Matrix of Odontasteridea morphological characters, Table 3 from Janosik & Halanych (2013) (Antarctic Inverts project)2016-12-27Preliminary and in progress
Toxin genes identified in Nemertean species, Table 3 from Whelan et al (2014) Genome Bio & Evol.(Antarctic Inverts project)2016-12-27Preliminary and in progress

Deployment Report

People

Principal Investigator: Kenneth M. Halanych
Auburn University

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Funded by the U.S. National Science Foundation