Amy Apprill

Affiliation: Woods Hole Oceanographic Institution (WHOI)

Address: []

Orcid: 0000-0002-4249-2977

Project: The Development of Microbial Associations in Major Reef Building Corals of the Pacific Ocean (2 datasets)

Dataset	Latest Version Date	Current State
T-RFLP, response of the microbial community to coral spawning, lagoon and reef flats in Kaneohe Bay, Oahu, Hawaii during 2006 - 2007 (MiCoDe project) Role: Contact	2015-03-12	Final no updates expected
Specificity of associations between bacteria and Pocillopora meandrina during early development in Kaneohe Bay, Oahu, Hawaii from 2008 (MiCoDe project) Role: Contact	2015-03-26	Final no updates expected

Project: Fundamental Coral-Microbial Associations (8 datasets)

Dataset	Latest Version Date	Current State
Partial SSU rRNA genes of bacteria and archaea from reef seawater samples produced using 515F/806R and 515F/806RB primers from the Bermuda, Red Sea, and Federated States of Micronesia in 2013 (Coral Microbial Relationships project) Role: Principal Investigator	2015-09-10	Final no updates expected
Bacterioplankton data from coral and coral mucus aquaria experiments conducted at Bermuda Institute of Ocean Sciences in 2013 Role: Principal Investigator	2016-07-29	Final no updates expected
Sequence data accession numbers originating from coral and coral mucus mesocosm experiments conducted at the Bermuda Institute of Ocean Sciences in 2013 Role: Principal Investigator	2025-02-25	Final with updates expected
Site descriptions and physical environmental conditions in coral microbiomes in the Florida Keys during 2013 (Coral Microbial Relationships project) Role: Principal Investigator	2025-02-25	Final no updates expected
Accession numbers and images of coral samples taken in the Florida Keys during 2013 (Coral Microbial Relationships project) Role: Principal Investigator	2016-10-19	Final no updates expected
Coral species list and site descriptions for studies conducted on the partial SSU rRNA genes of bacteria and archaea in the Florida Keys, Australia, and Micronesia in 2013. (Coral Microbial Relationships project) Role: Principal Investigator	2016-10-20	Final no updates expected
V4 amplicon sequencing of coral tissue collected from Micronesia, the Florida Keys, and Australia in 2013 (Coral Microbial Relationships project) Role: Principal Investigator	2016-10-20	Final no updates expected
A custom ARB database of SSU rRNA gene sequences from corals, as well representative cultivated and environmental sequences from public sources (Coral Microbial Relationships project) Roles: Principal Investigator, Contact	2021-06-10	Final no updates expected

Project: Coral Chorus: The Role of Soundscapes in Coral Reef Larval Recruitment and Biodiversity (6 datasets)

Dataset	Latest Version Date	Current State
Porites astreoides coral settlement counts collected in July of 2017 from an in situ larval coral settlement experiment in St. John, US Virgin Islands Roles: Principal Investigator, Contact	2018-09-21	Final no updates expected
Soundscape monitoring acoustic data collected in July of 2017 during an in situ larval coral settlement experiment in St. John, US Virgin Islands Roles: Principal Investigator, Contact	2018-07-27	Final no updates expected
Dates and locations of hydrophone deployments at coral reefs in St. John, U.S. Virgin Islands in 2016 and 2017 Role: Co-Principal Investigator	2020-12-11	Final no updates expected
Acoustic summary data from hydrophone deployments at coral reefs in St. John, U.S. Virgin Islands in 2016 and 2017 Role: Co-Principal Investigator	2020-12-11	Final no updates expected
Original recordings of reef soundscapes and recordings of playbacks from coral reefs in St. John, U.S. Virgin Islands collected between 2013 to 2017 Role: Co-Principal Investigator	2020-12-11	Data not available
Seawater microbial communities within coral reef seawater change over six years in response to disturbance Role: Co-Principal Investigator	2023-03-30	Final no updates expected

Project: Signature exometabolomes of Caribbean corals and influences on reef picoplankton (8 datasets)

Dataset	Latest Version Date	Current State
Diel, daily, and spatial variation of coral reef seawater microbial communities from US Virgin Islands, 2017 Role: Principal Investigator	2019-08-12	Final no updates expected
Flow cytometry and nutrient analyses data from a tidal study over 48 hours of mangrove, seagrass, and seawater from the US Virgin Islands in July of 2017 Role: Principal Investigator	2019-12-09	Final no updates expected
Sampling and accession information for extracellular reef seawater metabolites collected from the Jardines de la Reina reef-system, Cuba in November of 2017 Role: Principal Investigator	2023-10-20	Final no updates expected
Incubation experiments were conducted in St. John, US Virgin Islands to investigate the response of reef seawater microbial communities to the specific metabolites riboflavin, pantothenic acid, and caffeine. Role: Principal Investigator	2022-11-10	Final no updates expected
Incubation experiments were conducted in St. John, US Virgin Islands to investigate the macronutrient drawdown response of reef seawater microbial communities to exudates released from the coral species Porites astreoides and Gorgonia ventalina. Role: Principal Investigator	2022-11-10	Final no updates expected
Incubation experiments were conducted in St. John, US Virgin Islands to investigate the response of reef seawater microbial communities to the mixed exudates released from the coral species Porites astreoides and Gorgonia ventalina. Role: Principal Investigator	2022-11-10	Final no updates expected
Biogeochemistry, metabolomics, and metagenomics of Florida's Coral Reef from sampling conducted over 15 days in June 2019 Role: Principal Investigator	2023-03-08	Final no updates expected
Reef seawater biogeochemistry data from samples collected in the Jardines de la Reina reef-system, Cuba in November of 2017 Role: Principal Investigator	2023-10-26	Final no updates expected

Project: RAPID: Collaborative Research: Predicting the Spread of Multi-Species Coral Disease Using Species Immune Traits (2 datasets)

Dataset	Latest Version Date	Current State
Application of a rapid microbiome characterization pipeline to corals afflicted with Stony Coral Tissue Loss Disease in St. Thomas, US Virgin Islands. Role: Principal Investigator	2020-12-07	Final no updates expected
Ecological results of SCTLD multi-species transmission experiment at the University of the Virgin Islands Center for Marine and Environmental Studies Role: Co-Principal Investigator	2022-07-20	Final no updates expected

Project: Collaborative Research: The Influence of Sponge Holobiont Metabolism on Coral Reef Dissolved Organic Matter and Reef Microorganisms (9 datasets)

Dataset	Latest Version Date	Current State
Coral fragment surface area calculations utilizing two methods (tin foil and Image J) and corresponding zooxanthellae count data Role: Co-Principal Investigator	2022-09-21	Final no updates expected
Isotopic analysis of ¹³C and ¹⁵N for sponges, coral, and zooxanthellae (family Symbiodiniaceae) used in a 'pulse-chase' experiment to examine the uptake of sponge-derived nutrients by the coral holobiont Role: Co-Principal Investigator	2023-02-16	Final no updates expected
Surface water and N.digitalis inhalent/exhalent water sample nutrient and bacterioplankton metadata of Looe Key and Wonderland Reef conducted in 10-15 December 2023 Role: Co-Principal Investigator	2024-05-02	Final no updates expected
Seawater nutrient/metabolite and flow cytometry metadata - Picoplankton incubation experiment 2020 Role: Co-Principal Investigator	2023-09-07	Final no updates expected
Benthic survey of Looe Key and Wonderland Reef conducted in 10-15 December 2023 Role: Co-Principal Investigator	2024-05-02	Final no updates expected
Effects of sponge excurrent seawater on coral reef picoplankton composition in the Florida Keys January 2022 Role: Co-Principal Investigator	2025-06-17	Final no updates expected
Microbiome profiling of bacterioplankton communities on sponge excurrent water, coral exudate water, and surface reef water. Role: Co-Principal Investigator	2025-06-17	Final no updates expected
Sponge 3day VacuSIP Jan 2022 Role: Co-Principal Investigator	2025-06-18	Data not available
Metagenome profiles of common emergent Caribbean sponges collected from temporary artificial reef in the Florida Keys, USA in Jan 2022 Role: Co-Principal Investigator	2025-07-18	Preliminary and in progress

Project: EAGER: Collaborative Research: Quantifying coral microbiome dynamics under change (1 datasets)

Dataset	Latest Version Date	Current State
16S V4 rRNA gene tag sequences from reef seawater samples collected in the Florida Keys and the U.S. Virgin Islands in 2019-2020 Role: Principal Investigator	2021-08-13	Final no updates expected

Project: RAPID/MRI: Acquisition of a Triple-Quad Mass Spectrometer for Quantitative Identification of Dispersants and Water-Soluble Oil in the Gulf of Mexico (2 datasets)

Dataset	Latest Version Date	Current State
Sampling and accession information for extracellular reef seawater metabolites collected from the Jardines de la Reina reef-system, Cuba in November of 2017 Role: Principal Investigator	2023-10-20	Final no updates expected
Reef seawater biogeochemistry data from samples collected in the Jardines de la Reina reef-system, Cuba in November of 2017 Role: Principal Investigator	2023-10-26	Final no updates expected

Project: Collaborative Research: Cleaning stations as hubs for the maintenance and recovery of microbial diversity on coral reefs. (1 datasets)

Dataset	Latest Version Date	Current State
Microbiome dynamics of coral reef and cleanerfish from ecological surveys, in situ manipulations, and laboratory experiments conducted from 2020-2021 Role: Principal Investigator	2023-08-30	Final no updates expected